EnhancerDB
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  3. rs559003454[chr1:172614928]
Enhancers that have rs559003454[chr1:172614928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs559003454[chr1:172614928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172614907 172614928 IRF1 JASPAR yes 33143259
chr1 172614923 172614938 FOXP1 JASPAR yes 33143261
chr1 172614927 172614935 GATA3 JASPAR yes 33143262
Genes associated with rs559003454[chr1:172614928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More