EnhancerDB
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  3. rs559017699[chr12:54618130]
Enhancers that have rs559017699[chr12:54618130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54604917 54618893 enh2376
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs559017699[chr12:54618130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54618121 54618141 RREB1 JASPAR yes 121030303
chr12 54618125 54618135 SP1 JASPAR yes 121030304
chr12 54618128 54618133 SP1 TRANSFAC yes 121030305
Genes associated with rs559017699[chr12:54618130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More