EnhancerDB
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  3. rs559055666[chr19:1851842]
Enhancers that have rs559055666[chr19:1851842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs559055666[chr19:1851842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355215
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355216
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355217
chr19 1850599 1854179 ZNF274 GTRD no Blood (GM12878) 21832658
chr19 1850599 1856222 TCF7L2 GTRD no Colon (HCT116) 108355218
chr19 1850727 1858520 TCF7L2 GTRD no Colon (HCT116) 108355219
chr19 1850727 1858520 TCF7L2 GTRD no Colon (HCT116) 108355220
chr19 1850727 1858520 TCF7L2 GTRD no Colon (HCT116) 108355221
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 21832698
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355222
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355223
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355224
chr19 1851549 1852300 ZNF274 GTRD no Bone Marrow (K562) 21832699
chr19 1851652 1852193 ZNF274 GTRD no Blood (GM12878) 21832700
chr19 1851711 1852255 ZNF274 GTRD no Bone Marrow (K562) 21832701
chr19 1851716 1852944 ZNF274 GTRD no Bone Marrow (K562) 21832702
chr19 1851750 1854173 ZNF274 GTRD no Bone Marrow (K562) 21832703
chr19 1851774 1851983 ZNF274 GTRD no Bone Marrow (K562) 21832704
chr19 1851777 1852683 ZNF274 GTRD no Blood (GM12878) 21832705
chr19 1851816 1852180 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21832706
Genes associated with rs559055666[chr19:1851842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More