EnhancerDB
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  3. rs559174875[chr1:41374474]
Enhancers that have rs559174875[chr1:41374474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41361200 41377195 enh11779
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs559174875[chr1:41374474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41374470 41374474 YY1 TRANSFAC yes 28353551
chr1 41374471 41374481 HOXA13 JASPAR yes 28353552
chr1 41374471 41374481 HOXB13 JASPAR yes 28353553
chr1 41374471 41374481 HOXC10 JASPAR yes 28353554
chr1 41374471 41374481 HOXD11 JASPAR yes 28353555
chr1 41374471 41374481 HOXD13 JASPAR yes 28353556
chr1 41374471 41374482 HOXC11 JASPAR yes 28353557
chr1 41374471 41374482 HOXC13 JASPAR yes 28353558
chr1 41374472 41374481 CDX1 JASPAR yes 28353559
chr1 41374473 41374484 STAT1 JASPAR yes 28353560
Genes associated with rs559174875[chr1:41374474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More