EnhancerDB
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  3. rs559300477[chr2:201988341]
Enhancers that have rs559300477[chr2:201988341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201984705 201999595 enh6105
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus Thymus
Transcript factors that have rs559300477[chr2:201988341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201988317 201990929 POLR2A UCSC Txn Factor no Conserved 108434877
chr2 201988317 201990929 POLR2A UCSC Txn Factor no Conserved 108434878
chr2 201988338 201988347 PITX3 JASPAR yes 80135820
chr2 201988338 201988348 GSC2 JASPAR yes 80135821
chr2 201988339 201988347 OTX1 JASPAR yes 80135822
chr2 201988339 201988347 OTX2 JASPAR yes 80135823
Genes associated with rs559300477[chr2:201988341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More