EnhancerDB
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  3. rs55934339[chr3:122189376]
Enhancers that have rs55934339[chr3:122189376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 122186325 122190955 enh70828
Neural Stem Cells (H9)
Transcript factors that have rs55934339[chr3:122189376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 122189361 122189376 FOXP1 JASPAR yes 5268360
chr3 122189362 122189377 FOXA1 JASPAR yes 5268362
chr3 122189364 122189376 FOXI1 JASPAR yes 5268367
chr3 122189367 122189379 FOXC2 JASPAR yes 5268370
chr3 122189368 122189380 FOXI1 JASPAR yes 5268371
chr3 122189369 122189383 ONECUT3 JASPAR yes 5268372
chr3 122189369 122189384 FOXP1 JASPAR yes 5268373
chr3 122189371 122189383 FOXC2 JASPAR yes 5268374
chr3 122189372 122189384 FOXI1 JASPAR yes 5268375
chr3 122189373 122189387 ONECUT2 JASPAR yes 5268376
chr3 122189373 122189387 ONECUT3 JASPAR yes 5268377
chr3 122189373 122189388 FOXP1 JASPAR yes 5268378
chr3 122189373 122189388 HNF1A JASPAR yes 5268379
chr3 122189374 122189388 POU4F1 JASPAR yes 5268380
chr3 122189374 122189389 FOXA1 JASPAR yes 5268381
chr3 122189374 122189390 POU4F2 JASPAR yes 5268382
chr3 122189374 122189390 POU4F3 JASPAR yes 5268383
chr3 122189375 122189386 FOXB1 JASPAR yes 5268384
chr3 122189375 122189386 FOXC1 JASPAR yes 5268385
chr3 122189375 122189386 PROP1 JASPAR yes 5268386
chr3 122189375 122189387 FOXC2 JASPAR yes 5268387
chr3 122189376 122189388 FOXI1 JASPAR yes 5268388
Genes associated with rs55934339[chr3:122189376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More