EnhancerDB
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  3. rs559384468[chr1:220540618]
Enhancers that have rs559384468[chr1:220540618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs559384468[chr1:220540618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220540615 220540624 PITX3 JASPAR yes 35488904
chr1 220540615 220540625 GSC2 JASPAR yes 35488905
chr1 220540616 220540624 OTX2 JASPAR yes 35488906
Genes associated with rs559384468[chr1:220540618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More