EnhancerDB
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  3. rs559434454[chr17:36182212]
Enhancers that have rs559434454[chr17:36182212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 36171405 36195468 enh4382
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Kidney
Transcript factors that have rs559434454[chr17:36182212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 36181290 36184426 TCF7L2 GTRD no Colon (HCT116) 21751993
chr17 36181634 36184412 TCF7L2 GTRD no Colon (HCT116) 21751995
chr17 36181645 36182764 P63 GTRD no Skin (Keratinocyte) 21751996
chr17 36181772 36183481 P63 GTRD no Skin (Keratinocyte) 21751997
chr17 36181795 36182864 P63 GTRD no Skin (Keratinocyte) 21751999
chr17 36181883 36184660 TCF7L2 GTRD no Colon (HCT116) 21752000
chr17 36181901 36182893 P63 GTRD no Skin (Keratinocyte) 21752001
chr17 36182033 36184410 TCF7L2 GTRD no Colon (HCT116) 21752002
chr17 36182112 36184699 TCF7L2 GTRD no Colon (HCT116) 21752003
chr17 36182154 36182596 ZNF274 GTRD no Bone Marrow (K562) 21752004
chr17 36182166 36182759 TCF7L2 GTRD no Colon (HCT116) 21752005
chr17 36182179 36182758 TCF7L2 GTRD no Colon (HCT116) 21752006
chr17 36182197 36182212 FOXP1 JASPAR yes 54099780
chr17 36182198 36182212 FOXF2 JASPAR yes 54099783
chr17 36182199 36182213 IRF7 JASPAR yes 54099786
chr17 36182201 36182222 IRF1 JASPAR yes 54099789
chr17 36182203 36182218 STAT2 JASPAR yes 54099790
chr17 36182204 36182218 SPIC JASPAR yes 54099791
chr17 36182212 36182216 YY1 TRANSFAC yes 54099792
Genes associated with rs559434454[chr17:36182212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More