EnhancerDB
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  3. rs559452538[chr5:172887357]
Enhancers that have rs559452538[chr5:172887357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172875285 172888095 enh22823
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Heart
Transcript factors that have rs559452538[chr5:172887357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172887350 172887360 REL JASPAR yes 67873513
chr5 172887350 172887361 NFKB1 JASPAR yes 67873514
chr5 172887352 172887366 STAT1 JASPAR yes 67873515
chr5 172887353 172887363 NFATC3 JASPAR yes 67873516
Genes associated with rs559452538[chr5:172887357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More