EnhancerDB
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  3. rs55949611[chr16:11080248]
Enhancers that have rs55949611[chr16:11080248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11079525 11094375 enh3881
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs55949611[chr16:11080248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11075287 11080258 ZNF274 GTRD no Blood (GM12878) 21689467
chr16 11075287 11080258 ZNF274 GTRD no Blood (GM12878) 108179867
chr16 11075287 11080258 ZNF274 GTRD no Blood (GM12878) 108179868
chr16 11075601 11080625 ZNF274 GTRD no Blood (GM12878) 21689468
chr16 11075601 11080625 ZNF274 GTRD no Blood (GM12878) 108179886
chr16 11075601 11080625 ZNF274 GTRD no Blood (GM12878) 108179887
chr16 11077403 11080431 ZNF274 GTRD no Blood (GM12878) 21689471
chr16 11077403 11080431 ZNF274 GTRD no Blood (GM12878) 108179936
chr16 11077870 11080657 ZBTB33 GTRD no Brain (SK-N-SH) 21689476
chr16 11077870 11080657 ZBTB33 GTRD no Brain (SK-N-SH) 108179963
chr16 11078601 11080449 ZBTB33 GTRD no Brain (SK-N-SH) 21689477
chr16 11078601 11080449 ZBTB33 GTRD no Brain (SK-N-SH) 108179993
Genes associated with rs55949611[chr16:11080248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More