EnhancerDB
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  3. rs559540657[chr10:28670414]
Enhancers that have rs559540657[chr10:28670414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28652705 28673755 enh13080
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs559540657[chr10:28670414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28670402 28670417 SOX21 JASPAR yes 126228346
chr10 28670402 28670418 SOX4 JASPAR yes 126228347
chr10 28670410 28670422 FOXI1 JASPAR yes 126228348
chr10 28670411 28670422 FOXP2 JASPAR yes 126228349
chr10 28670411 28670425 FOXF2 JASPAR yes 126228350
chr10 28670412 28670420 FOXG1 JASPAR yes 126228351
chr10 28670413 28670424 FOXH1 JASPAR yes 126228352
Genes associated with rs559540657[chr10:28670414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More