-
Home
- SNP
- rs55954688[chr1:228275257]
Enhancers that have rs55954688[chr1:228275257]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
228267485 |
228277903 |
enh89543 |
|
|
Transcript factors that have rs55954688[chr1:228275257]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
228272646
|
228276693
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876861
|
|
|
chr1
|
228272646
|
228276693
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876862
|
|
|
chr1
|
228272946
|
228277339
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876864
|
|
|
chr1
|
228272946
|
228277339
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876865
|
|
|
chr1
|
228272967
|
228277706
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876866
|
|
|
chr1
|
228272967
|
228277706
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876867
|
|
|
chr1
|
228273140
|
228277516
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876871
|
|
|
chr1
|
228273140
|
228277516
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876872
|
|
|
chr1
|
228273329
|
228275262
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876874
|
|
|
chr1
|
228273329
|
228275262
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876875
|
|
|
chr1
|
228273379
|
228275872
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876876
|
|
|
chr1
|
228273379
|
228275872
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876877
|
|
|
chr1
|
228273459
|
228275872
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876880
|
|
|
chr1
|
228273459
|
228275872
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876881
|
|
|
chr1
|
228273606
|
228277082
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876889
|
|
|
chr1
|
228273606
|
228277082
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876890
|
|
|
chr1
|
228274213
|
228276739
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876910
|
|
|
chr1
|
228274551
|
228276954
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876916
|
|
|
chr1
|
228274614
|
228277109
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876917
|
|
|
chr1
|
228274675
|
228277247
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876918
|
|
|
chr1
|
228275249
|
228275269
|
PPARG
|
JASPAR
|
yes
|
|
35900453
|
|
Genes associated with rs55954688[chr1:228275257], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |