-
Home
- SNP
- rs559586161[chr1:172104816]
Enhancers that have rs559586161[chr1:172104816]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
172101325 |
172108295 |
enh27233 |
|
|
Transcript factors that have rs559586161[chr1:172104816]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
172104061
|
172106252
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107845484
|
|
|
chr1
|
172104802
|
172104823
|
IRF1
|
JASPAR
|
yes
|
|
33110103
|
|
|
chr1
|
172104808
|
172104829
|
IRF1
|
JASPAR
|
yes
|
|
33110104
|
|
|
chr1
|
172104810
|
172104825
|
IRF9
|
JASPAR
|
yes
|
|
33110105
|
|
|
chr1
|
172104811
|
172104825
|
IRF8
|
JASPAR
|
yes
|
|
33110106
|
|
|
chr1
|
172104812
|
172104826
|
STAT1
|
JASPAR
|
yes
|
|
33110107
|
|
|
chr1
|
172104812
|
172104827
|
STAT2
|
JASPAR
|
yes
|
|
33110108
|
|
Genes associated with rs559586161[chr1:172104816], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |