EnhancerDB
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  3. rs559608610[chr19:10354618]
Enhancers that have rs559608610[chr19:10354618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs559608610[chr19:10354618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 21848622
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 108383131
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 21848625
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 108383134
chr19 10352291 10354706 TCF7L2 GTRD no Colon (HCT116) 21848627
chr19 10352291 10354706 TCF7L2 GTRD no Colon (HCT116) 108383136
chr19 10352319 10354620 TCF7L2 GTRD no Colon (HCT116) 21848628
chr19 10352319 10354620 TCF7L2 GTRD no Colon (HCT116) 108383137
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 21848630
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 108383139
chr19 10354302 10354658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848667
chr19 10354326 10354662 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848668
chr19 10354351 10354641 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848670
chr19 10354370 10354670 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848672
chr19 10354613 10354624 FOSL2 JASPAR yes 112416728
Genes associated with rs559608610[chr19:10354618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More