EnhancerDB
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  3. rs559631538[chr1:220539327]
Enhancers that have rs559631538[chr1:220539327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs559631538[chr1:220539327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220539317 220539333 SOX4 JASPAR yes 35488701
chr1 220539318 220539333 SOX21 JASPAR yes 35488702
chr1 220539322 220539330 MEIS2 JASPAR yes 35488703
chr1 220539322 220539330 MEIS3 JASPAR yes 35488704
Genes associated with rs559631538[chr1:220539327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More