EnhancerDB
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  3. rs559678371[chr17:61354639]
Enhancers that have rs559678371[chr17:61354639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 61349065 61360115 enh32269
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs559678371[chr17:61354639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 61350441 61357419 ZNF143 GTRD no Epithelial (MCF-7) 21778460
chr17 61350441 61357419 ZNF143 GTRD no Epithelial (MCF-7) 108281109
chr17 61350441 61357419 ZNF143 GTRD no Epithelial (MCF-7) 108281110
chr17 61350441 61357419 ZNF143 GTRD no Epithelial (MCF-7) 108281111
chr17 61350441 61357431 ZNF143 GTRD no Epithelial (MCF-7) 21778461
chr17 61350441 61357431 ZNF143 GTRD no Epithelial (MCF-7) 108281112
chr17 61350441 61357431 ZNF143 GTRD no Epithelial (MCF-7) 108281113
chr17 61350441 61357431 ZNF143 GTRD no Epithelial (MCF-7) 108281114
chr17 61350461 61358263 ZNF143 GTRD no Epithelial (MCF-7) 21778462
chr17 61350461 61358263 ZNF143 GTRD no Epithelial (MCF-7) 108281115
chr17 61350461 61358263 ZNF143 GTRD no Epithelial (MCF-7) 108281116
chr17 61350461 61358263 ZNF143 GTRD no Epithelial (MCF-7) 108281117
chr17 61350472 61357778 ZNF143 GTRD no Epithelial (MCF-7) 21778463
chr17 61350472 61357778 ZNF143 GTRD no Epithelial (MCF-7) 108281118
chr17 61350472 61357778 ZNF143 GTRD no Epithelial (MCF-7) 108281119
chr17 61350472 61357778 ZNF143 GTRD no Epithelial (MCF-7) 108281120
chr17 61351166 61358209 ZNF143 GTRD no Epithelial (MCF-7) 21778464
chr17 61351166 61358209 ZNF143 GTRD no Epithelial (MCF-7) 108281121
chr17 61351166 61358209 ZNF143 GTRD no Epithelial (MCF-7) 108281122
chr17 61351166 61358209 ZNF143 GTRD no Epithelial (MCF-7) 108281123
chr17 61352078 61357757 ZBTB33 GTRD no Lung (A549) 108281124
chr17 61352078 61357757 ZBTB33 GTRD no Lung (A549) 108281125
chr17 61352078 61357757 ZBTB33 GTRD no Lung (A549) 108281126
chr17 61352096 61355679 ZNF143 GTRD no Epithelial (MCF-7) 21778465
chr17 61352096 61355679 ZNF143 GTRD no Epithelial (MCF-7) 108281127
chr17 61352106 61358267 ZNF143 GTRD no Epithelial (MCF-7) 21778466
chr17 61352106 61358267 ZNF143 GTRD no Epithelial (MCF-7) 108281128
chr17 61352106 61358267 ZNF143 GTRD no Epithelial (MCF-7) 108281129
chr17 61352106 61358267 ZNF143 GTRD no Epithelial (MCF-7) 108281130
chr17 61352111 61355524 ZNF143 GTRD no Epithelial (MCF-7) 21778467
chr17 61352111 61355524 ZNF143 GTRD no Epithelial (MCF-7) 108281131
chr17 61352155 61355734 ZNF143 GTRD no Epithelial (MCF-7) 21778468
chr17 61352155 61355734 ZNF143 GTRD no Epithelial (MCF-7) 108281132
chr17 61354174 61357341 ZNF274 GTRD no Liver (HepG2) 108281190
chr17 61354174 61357341 ZNF274 GTRD no Liver (HepG2) 108281191
chr17 61354627 61354648 IRF1 JASPAR yes 55243689
chr17 61354630 61354644 SPI1 JASPAR yes 55243690
chr17 61354630 61354651 IRF1 JASPAR yes 55243691
chr17 61354633 61354647 SPI1 JASPAR yes 55243692
chr17 61354633 61354654 IRF1 JASPAR yes 55243693
chr17 61354634 61354655 IRF1 JASPAR yes 55243694
chr17 61354636 61354651 FOXP1 JASPAR yes 55243695
chr17 61354638 61354653 FOXP1 JASPAR yes 55243696
chr17 61354638 61354659 IRF1 JASPAR yes 55243697
chr17 61354639 61354654 FOXP1 JASPAR yes 55243698
chr17 61354639 61354660 IRF1 JASPAR yes 55243699
Genes associated with rs559678371[chr17:61354639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More