EnhancerDB
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  3. rs55969935[chr11:66646365]
Enhancers that have rs55969935[chr11:66646365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66643125 66662804 enh1843
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55969935[chr11:66646365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66646360 66646372 TFAP2A JASPAR yes 39384641
chr11 66646360 66646372 TFAP2B JASPAR yes 39384642
chr11 66646360 66646372 TFAP2C JASPAR yes 39384643
chr11 66646360 66646375 TFAP2A JASPAR yes 39384644
chr11 66646361 66646372 TFAP2A JASPAR yes 39384645
chr11 66646361 66646372 TFAP2B JASPAR yes 39384646
chr11 66646362 66646371 TFAP2A JASPAR yes 39384647
chr11 66646365 66646378 NFKB1 JASPAR yes 39384648
chr11 66646365 66646378 NFKB2 JASPAR yes 39384649
Genes associated with rs55969935[chr11:66646365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More