EnhancerDB
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  3. rs559766044[chr17:62679483]
Enhancers that have rs559766044[chr17:62679483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs559766044[chr17:62679483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62679248 62683082 ZNF143 GTRD no Epithelial (MCF-7) 21778916
chr17 62679284 62681253 TCF7L2 GTRD no Colon (HCT116) 21778917
chr17 62679301 62682615 ZNF143 GTRD no Epithelial (MCF-7) 21778918
chr17 62679385 62681238 TCF7L2 GTRD no Colon (HCT116) 21778919
chr17 62679402 62682688 ZNF143 GTRD no Epithelial (MCF-7) 21778920
chr17 62679426 62680481 TCF7L2 GTRD no Colon (HCT116) 21778921
chr17 62679427 62680673 TCF7L2 GTRD no Colon (HCT116) 21778922
chr17 62679445 62681322 TCF7L2 GTRD no Colon (HCT116) 21778923
chr17 62679474 62679489 NR2C2 JASPAR yes 55311056
chr17 62679478 62679488 SP1 JASPAR yes 55311057
chr17 62679480 62679485 SP1 TRANSFAC yes 55311058
chr17 62679480 62679486 SP1 TRANSFAC yes 55311059
chr17 62679480 62679487 SP1 TRANSFAC yes 55311060
chr17 62679481 62679489 WT1 TRANSFAC yes 55311061
chr17 62679483 62679492 SP1 TRANSFAC yes 55311062
Genes associated with rs559766044[chr17:62679483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More