EnhancerDB
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  3. rs559789139[chr1:8102035]
Enhancers that have rs559789139[chr1:8102035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8089365 8111955 enh11459
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559789139[chr1:8102035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8102026 8102047 IRF1 JASPAR yes 26503612
chr1 8102029 8102043 SPI1 JASPAR yes 26503613
chr1 8102031 8102052 IRF1 JASPAR yes 26503614
chr1 8102032 8102047 FOXP1 JASPAR yes 26503615
chr1 8102032 8102053 IRF1 JASPAR yes 26503616
chr1 8102033 8102044 FOXP2 JASPAR yes 26503617
chr1 8102033 8102048 STAT2 JASPAR yes 26503618
chr1 8102033 8102053 RREB1 JASPAR yes 26503619
chr1 8102034 8102049 FOXP1 JASPAR yes 26503620
Genes associated with rs559789139[chr1:8102035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More