EnhancerDB
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  3. rs559815173[chr6:139538739]
Enhancers that have rs559815173[chr6:139538739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139537205 139543415 enh9387
Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Heart
Transcript factors that have rs559815173[chr6:139538739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139538734 139538747 SMAD2 JASPAR yes 105773153
chr6 139538737 139538747 TBR1 JASPAR yes 105773154
chr6 139538738 139538748 TBX21 JASPAR yes 105773155
chr6 139538739 139538747 MGA JASPAR yes 105773156
chr6 139538739 139538747 TBX15 JASPAR yes 105773157
chr6 139538739 139538747 TBX1 JASPAR yes 105773158
chr6 139538739 139538747 TBX4 JASPAR yes 105773159
chr6 139538739 139538747 TBX5 JASPAR yes 105773160
chr6 139538739 139538748 ZEB1 JASPAR yes 105773161
chr6 139538739 139538751 PKNOX1 JASPAR yes 105773162
chr6 139538739 139538751 TGIF1 JASPAR yes 105773163
chr6 139538739 139538752 ZBTB18 JASPAR yes 105773164
Genes associated with rs559815173[chr6:139538739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More