EnhancerDB
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  3. rs559838501[chr1:42144337]
Enhancers that have rs559838501[chr1:42144337]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559838501[chr1:42144337]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42144331 42144339 SP1 TRANSFAC yes 28409112
chr1 42144331 42144341 SP1 JASPAR yes 28409113
chr1 42144336 42144350 PLAG1 JASPAR yes 28409114
chr1 42144337 42144348 EBF1 JASPAR yes 28409115
Genes associated with rs559838501[chr1:42144337], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More