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- rs55992230[chr16:88957075]
Enhancers that have rs55992230[chr16:88957075]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88946220 |
88957735 |
enh44357 |
|
|
Transcript factors that have rs55992230[chr16:88957075]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88955590
|
88957658
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224205
|
|
|
chr16
|
88955726
|
88957877
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108224207
|
|
|
chr16
|
88955773
|
88957786
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224208
|
|
|
chr16
|
88955917
|
88958296
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108224212
|
|
Genes associated with rs55992230[chr16:88957075], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
88922628
|
88929094
|
+
|
TRAPPC2L
|
ENSG00000167515.6
|
88922628
|
27981
|
Ovary
|
0.287582
|
15167
|
|