EnhancerDB
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  3. rs559992254[chr1:116849155]
Enhancers that have rs559992254[chr1:116849155]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559992254[chr1:116849155]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116848553 116849529 ZNF274 GTRD no Bone Marrow (K562) 21331925
chr1 116848564 116849376 ZNF274 GTRD no Bone Marrow (K562) 21331926
chr1 116848565 116849283 ZNF274 GTRD no Bone Marrow (K562) 21331927
chr1 116848594 116849466 ZNF274 GTRD no Cervix (HeLa-S3) 21331928
chr1 116848666 116849548 ZNF143 GTRD no Epithelial (MCF-7) 21331929
chr1 116848706 116849264 ZNF274 GTRD no Bone Marrow (K562) 21331930
chr1 116848707 116849265 ZNF143 GTRD no Epithelial (MCF-7) 21331931
chr1 116848711 116849492 ZNF274 GTRD no Bone Marrow (K562) 21331932
chr1 116848760 116849206 ZNF274 GTRD no Bone Marrow (K562) 21331934
chr1 116848849 116849210 ZNF274 GTRD no Liver (HepG2) 21331940
chr1 116848849 116849537 ZNF274 GTRD no Bone Marrow (K562) 21331941
chr1 116848860 116849184 ZNF274 GTRD no Bone Marrow (K562) 21331942
chr1 116848866 116849204 ZNF274 GTRD no Liver (HepG2) 21331944
chr1 116849153 116849163 TEAD4 JASPAR yes 31792097
chr1 116849154 116849162 TEAD3 JASPAR yes 31792098
Genes associated with rs559992254[chr1:116849155], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More