EnhancerDB
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  3. rs56005724[chr1:226320737]
Enhancers that have rs56005724[chr1:226320737]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226318797 226325655 enh50228
Prostate (PC-3) Prostate (RWPE1) Large Intestine Stomach Thyroid Pancreas Epithelial (MCF-7)
Transcript factors that have rs56005724[chr1:226320737]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226320502 226321158 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21386933
chr1 226320502 226321158 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107875646
chr1 226320571 226321392 ZNF274 GTRD no Bone Marrow (K562) 107875647
chr1 226320617 226321575 ZNF274 GTRD no Bone Marrow (K562) 107875648
chr1 226320636 226321206 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21386934
chr1 226320636 226321206 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107875649
chr1 226320645 226320949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875650
chr1 226320671 226320915 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107875651
chr1 226320688 226320998 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21386935
chr1 226320688 226320998 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107875652
chr1 226320718 226320958 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875653
chr1 226320725 226320989 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875654
chr1 226320733 226320742 SNAI2 JASPAR yes 35794459
chr1 226320734 226320739 USF2 TRANSFAC yes 35794460
Genes associated with rs56005724[chr1:226320737], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More