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- rs56024538[chr6:36086275]
Enhancers that have rs56024538[chr6:36086275]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr6 |
36078905 |
36090575 |
enh9082 |
|
|
Transcript factors that have rs56024538[chr6:36086275]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr6
|
36086016
|
36086872
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108539865
|
|
|
chr6
|
36086186
|
36086363
|
TCF7L2
|
UCSC Txn Factor
|
no
|
Conserved
|
108539866
|
|
|
chr6
|
36086263
|
36086278
|
LEF1
|
JASPAR
|
yes
|
|
101324133
|
|
|
chr6
|
36086264
|
36086278
|
TCF7L2
|
JASPAR
|
yes
|
|
101324134
|
|
|
chr6
|
36086272
|
36086278
|
ZNF354C
|
JASPAR
|
yes
|
|
101324138
|
|
Genes associated with rs56024538[chr6:36086275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr6
|
36210980
|
36276372
|
+
|
PNPLA1
|
ENSG00000180316.7
|
36210980
|
124705
|
Spleen
|
0.356032
|
6522
|
|
|
chr6
|
36973422
|
36996846
|
+
|
FGD2
|
ENSG00000146192.10
|
36973422
|
887147
|
Liver
|
0.465556
|
6536
|
|