EnhancerDB
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  3. rs560258061[chr1:42673543]
Enhancers that have rs560258061[chr1:42673543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42666765 42684795 enh11799
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Liver Bone (Osteoblast) Placenta Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs560258061[chr1:42673543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42673532 42673543 HOXA10 JASPAR yes 28448053
chr1 42673533 42673543 HOXA13 JASPAR yes 28448055
chr1 42673533 42673543 HOXB13 JASPAR yes 28448056
chr1 42673533 42673543 HOXD13 JASPAR yes 28448057
chr1 42673533 42673548 MEF2C JASPAR yes 28448058
chr1 42673534 42673549 MEF2A JASPAR yes 28448059
chr1 42673535 42673546 FOXC1 JASPAR yes 28448063
chr1 42673535 42673547 MEF2A JASPAR yes 28448064
chr1 42673535 42673547 MEF2B JASPAR yes 28448065
chr1 42673535 42673547 MEF2D JASPAR yes 28448066
chr1 42673536 42673546 MEF2A JASPAR yes 28448067
chr1 42673543 42673546 MYB TRANSFAC yes 28448068
Genes associated with rs560258061[chr1:42673543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More