EnhancerDB
  1. Home
  2. SNP
  3. rs56055669[chr17:64939684]
Enhancers that have rs56055669[chr17:64939684]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs56055669[chr17:64939684]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64937384 64941120 ZNF143 GTRD no Epithelial (MCF-7) 21781904
chr17 64937407 64941181 ZNF143 GTRD no Epithelial (MCF-7) 21781905
chr17 64937651 64941627 ZNF143 GTRD no Epithelial (MCF-7) 21781907
chr17 64939560 64940030 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21781950
chr17 64939677 64939698 IRF1 JASPAR yes 55472382
chr17 64939679 64939694 PRDM1 JASPAR yes 55472383
chr17 64939679 64939694 STAT2 JASPAR yes 55472384
Genes associated with rs56055669[chr17:64939684], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More