EnhancerDB
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  3. rs56058941[chr2:29327153]
Enhancers that have rs56058941[chr2:29327153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 29326250 29340371 enh18402
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs56058941[chr2:29327153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 29327139 29327159 RREB1 JASPAR yes 72688188
chr2 29327139 29327160 IRF1 JASPAR yes 72688189
chr2 29327140 29327155 FOXP1 JASPAR yes 72688192
chr2 29327142 29327162 RREB1 JASPAR yes 72688193
chr2 29327143 29327163 RREB1 JASPAR yes 72688194
chr2 29327146 29327158 FOXI1 JASPAR yes 72688196
chr2 29327146 29327161 FOXP1 JASPAR yes 72688197
chr2 29327149 29327164 FOXA1 JASPAR yes 72688198
chr2 29327150 29327162 FOXI1 JASPAR yes 72688199
chr2 29327151 29327163 FOXC2 JASPAR yes 72688200
chr2 29327153 29327164 FOXA1 JASPAR yes 72688201
Genes associated with rs56058941[chr2:29327153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More