EnhancerDB
  1. Home
  2. SNP
  3. rs560610229[chr1:33804147]
Enhancers that have rs560610229[chr1:33804147]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33797825 33814983 enh221
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Bone (Osteoblast) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 33804092 33804324 vista1154
VISTA
Transcript factors that have rs560610229[chr1:33804147]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33804030 33804700 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802806
chr1 33804030 33804700 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802807
chr1 33804143 33804157 TLX1 JASPAR yes 28041951
chr1 33804143 33804157 TLX1 JASPAR yes 118270136
chr1 33804144 33804158 TLX1 JASPAR yes 28041952
chr1 33804144 33804158 TLX1 JASPAR yes 118270137
chr1 33804145 33804157 INSM1 JASPAR yes 28041953
chr1 33804145 33804157 INSM1 JASPAR yes 118270138
chr1 33804145 33804159 GLIS2 JASPAR yes 28041954
chr1 33804145 33804159 GLIS3 JASPAR yes 28041955
chr1 33804145 33804159 GLIS2 JASPAR yes 118270139
chr1 33804145 33804159 GLIS3 JASPAR yes 118270140
chr1 33804145 33804160 ZIC3 JASPAR yes 28041956
chr1 33804145 33804160 ZIC3 JASPAR yes 118270141
Genes associated with rs560610229[chr1:33804147], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More