EnhancerDB
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  3. rs560766828[chr6:112248824]
Enhancers that have rs560766828[chr6:112248824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112237912 112250975 enh39331
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs560766828[chr6:112248824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112248817 112248832 TFAP2A JASPAR yes 104389122
chr6 112248818 112248831 TFAP2A JASPAR yes 104389123
chr6 112248818 112248831 TFAP2B JASPAR yes 104389124
chr6 112248818 112248831 TFAP2C JASPAR yes 104389125
chr6 112248819 112248832 TFAP2A JASPAR yes 104389126
chr6 112248819 112248832 TFAP2B JASPAR yes 104389127
chr6 112248819 112248832 TFAP2C JASPAR yes 104389128
chr6 112248819 112248834 TFAP2A JASPAR yes 104389129
chr6 112248819 112248834 TFAP2C JASPAR yes 104389130
chr6 112248820 112248832 TFAP2A JASPAR yes 104389131
chr6 112248820 112248832 TFAP2B JASPAR yes 104389132
chr6 112248820 112248832 TFAP2C JASPAR yes 104389133
chr6 112248824 112248833 THAP1 JASPAR yes 104389134
Genes associated with rs560766828[chr6:112248824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More