EnhancerDB
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  3. rs560839354[chr17:54759008]
Enhancers that have rs560839354[chr17:54759008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54753045 54762155 enh17235
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Lung (PC-9) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas
Transcript factors that have rs560839354[chr17:54759008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54759000 54759010 FIGLA JASPAR yes 54902813
chr17 54759000 54759010 ID4 JASPAR yes 54902814
chr17 54759000 54759010 TCF3 JASPAR yes 54902815
chr17 54759000 54759010 TCF4 JASPAR yes 54902816
Genes associated with rs560839354[chr17:54759008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More