EnhancerDB
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  3. rs560841340[chr1:54926693]
Enhancers that have rs560841340[chr1:54926693]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54923405 54933545 enh11870
Bone Marrow (K562) Brain (SK-N-SH) Blood (T-cell) Muscle (A673) Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
chr1 54925046 54928826 vista50
VISTA
Transcript factors that have rs560841340[chr1:54926693]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54926689 54926700 YY2 JASPAR yes 28986394
chr1 54926689 54926700 YY2 JASPAR yes 71131738
chr1 54926690 54926702 YY1 JASPAR yes 28986395
chr1 54926690 54926702 YY1 JASPAR yes 71131739
chr1 54926693 54926699 YY1 JASPAR yes 28986396
chr1 54926693 54926699 YY1 JASPAR yes 71131740
Genes associated with rs560841340[chr1:54926693], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More