EnhancerDB
  1. Home
  2. SNP
  3. rs560873999[chr1:42188565]
Enhancers that have rs560873999[chr1:42188565]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs560873999[chr1:42188565]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42188545 42188566 ZNF263 JASPAR yes 28413849
chr1 42188548 42188569 ZNF263 JASPAR yes 28413853
chr1 42188549 42188570 IRF1 JASPAR yes 28413855
chr1 42188553 42188574 IRF1 JASPAR yes 28413858
chr1 42188555 42188570 IRF9 JASPAR yes 28413859
chr1 42188556 42188570 IRF7 JASPAR yes 28413860
chr1 42188556 42188570 IRF8 JASPAR yes 28413861
chr1 42188557 42188571 SPIC JASPAR yes 28413862
chr1 42188557 42188571 STAT1 JASPAR yes 28413863
chr1 42188557 42188572 PRDM1 JASPAR yes 28413864
chr1 42188557 42188572 STAT2 JASPAR yes 28413865
chr1 42188558 42188579 ZNF263 JASPAR yes 28413866
chr1 42188560 42188573 SMAD2 JASPAR yes 28413867
chr1 42188561 42188582 ZNF263 JASPAR yes 28413868
Genes associated with rs560873999[chr1:42188565], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More