EnhancerDB
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  3. rs560947211[chr1:185409725]
Enhancers that have rs560947211[chr1:185409725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185406085 185413495 enh12475
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Lung (PC-9) Pancreas Spleen Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs560947211[chr1:185409725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185408266 185409807 ZNF274 GTRD no Blood (GM12878) 107852308
chr1 185408266 185409807 ZNF274 GTRD no Blood (GM12878) 107852309
chr1 185408266 185409807 ZNF274 GTRD no Blood (GM12878) 107852310
chr1 185409159 185409755 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852358
chr1 185409159 185409755 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852359
chr1 185409198 185409817 ZNF274 GTRD no Bone Marrow (K562) 107852360
chr1 185409198 185409817 ZNF274 GTRD no Bone Marrow (K562) 107852361
chr1 185409209 185409729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852362
chr1 185409209 185409729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852363
chr1 185409275 185410104 ZNF274 GTRD no Bone Marrow (K562) 107852364
chr1 185409399 185409788 ZNF274 GTRD no Liver (HepG2) 107852372
chr1 185409421 185409858 ZNF274 GTRD no Blood (GM12878) 107852376
chr1 185409451 185409765 ZNF274 GTRD no Bone Marrow (K562) 107852383
chr1 185409479 185409732 ZNF274 GTRD no Bone Marrow (K562) 107852384
chr1 185409724 185409730 TBP TRANSFAC yes 33810899
Genes associated with rs560947211[chr1:185409725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More