EnhancerDB
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  3. rs560958714[chr1:12688416]
Enhancers that have rs560958714[chr1:12688416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12684932 12692035 enh66844
Muscle (A673) Neural Stem Cells (H9)
Transcript factors that have rs560958714[chr1:12688416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12688397 12688418 IRF1 JASPAR yes 26840399
chr1 12688398 12688419 IRF1 JASPAR yes 26840401
chr1 12688399 12688420 IRF1 JASPAR yes 26840403
chr1 12688400 12688421 IRF1 JASPAR yes 26840405
chr1 12688401 12688416 FOXP1 JASPAR yes 26840406
chr1 12688401 12688422 IRF1 JASPAR yes 26840407
chr1 12688402 12688417 FOXP1 JASPAR yes 26840408
chr1 12688402 12688423 IRF1 JASPAR yes 26840409
chr1 12688403 12688418 FOXP1 JASPAR yes 26840410
chr1 12688403 12688424 IRF1 JASPAR yes 26840411
chr1 12688404 12688419 FOXP1 JASPAR yes 26840412
chr1 12688404 12688425 IRF1 JASPAR yes 26840413
chr1 12688405 12688420 FOXP1 JASPAR yes 26840414
chr1 12688405 12688426 IRF1 JASPAR yes 26840415
chr1 12688406 12688421 FOXP1 JASPAR yes 26840416
chr1 12688406 12688427 IRF1 JASPAR yes 26840417
chr1 12688407 12688422 FOXP1 JASPAR yes 26840418
chr1 12688409 12688424 FOXP1 JASPAR yes 26840419
chr1 12688410 12688431 IRF1 JASPAR yes 26840420
chr1 12688411 12688426 FOXP1 JASPAR yes 26840421
chr1 12688411 12688432 IRF1 JASPAR yes 26840422
chr1 12688412 12688433 IRF1 JASPAR yes 26840423
chr1 12688416 12688431 PRDM1 JASPAR yes 26840424
chr1 12688416 12688437 IRF1 JASPAR yes 26840425
Genes associated with rs560958714[chr1:12688416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More