EnhancerDB
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  3. rs560962399[chr1:232677028]
Enhancers that have rs560962399[chr1:232677028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232662605 232677138 enh12784
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs560962399[chr1:232677028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232677014 232677031 ZNF410 JASPAR yes 36169013
chr1 232677016 232677028 TEF JASPAR yes 36169014
chr1 232677019 232677036 ZNF410 JASPAR yes 36169016
chr1 232677021 232677033 TEF JASPAR yes 36169017
chr1 232677024 232677041 ZNF410 JASPAR yes 36169019
chr1 232677026 232677038 TEF JASPAR yes 36169020
chr1 232677028 232677031 MYB TRANSFAC yes 36169021
Genes associated with rs560962399[chr1:232677028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More