EnhancerDB
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  3. rs56146949[chr1:17232299]
Enhancers that have rs56146949[chr1:17232299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs56146949[chr1:17232299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17232294 17232304 HOXB13 JASPAR yes 27064248
chr1 17232294 17232304 HOXD13 JASPAR yes 27064249
Genes associated with rs56146949[chr1:17232299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More