EnhancerDB
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  3. rs561490434[chr14:49979023]
Enhancers that have rs561490434[chr14:49979023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 49969885 49982435 enh30857
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Epithelial (MCF-7)
chr14 49979013 49979291 vista17655
VISTA
Transcript factors that have rs561490434[chr14:49979023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 49978817 49979560 TCF7L2 GTRD no Colon (HCT116) 108099878
chr14 49978980 49979300 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21615268
chr14 49978980 49979300 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108099879
chr14 49978989 49979329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21615269
chr14 49978989 49979329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108099880
chr14 49979023 49979036 SMAD2 JASPAR yes 107542891
chr14 49979023 49979036 SMAD2 JASPAR yes 115194542
Genes associated with rs561490434[chr14:49979023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More