EnhancerDB
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  3. rs561656119[chr1:20479930]
Enhancers that have rs561656119[chr1:20479930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20476545 20487455 enh11579
Prostate (PC-3) Bone (Osteoblast) Stomach Placenta Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs561656119[chr1:20479930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20479923 20479933 GSX2 JASPAR yes 27232580
chr1 20479924 20479932 BARX1 JASPAR yes 27232581
chr1 20479925 20479940 FOXP1 JASPAR yes 27232582
chr1 20479925 20479946 IRF1 JASPAR yes 27232583
chr1 20479926 20479947 IRF1 JASPAR yes 27232584
chr1 20479927 20479942 FOXP1 JASPAR yes 27232585
chr1 20479928 20479943 FOXP1 JASPAR yes 27232586
chr1 20479929 20479935 TBP TRANSFAC yes 27232587
chr1 20479929 20479944 FOXP1 JASPAR yes 27232588
chr1 20479929 20479950 IRF1 JASPAR yes 27232589
chr1 20479930 20479945 FOXP1 JASPAR yes 27232590
chr1 20479930 20479951 IRF1 JASPAR yes 27232591
Genes associated with rs561656119[chr1:20479930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More