EnhancerDB
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  3. rs561730627[chr1:200254536]
Enhancers that have rs561730627[chr1:200254536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs561730627[chr1:200254536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200253459 200255000 ZNF274 GTRD no Blood (GM12878) 21362707
chr1 200253582 200254861 ZNF274 GTRD no Blood (GM12878) 21362708
chr1 200253596 200255018 ZNF274 GTRD no Blood (GM12878) 21362709
chr1 200253599 200255148 ZNF274 GTRD no Blood (GM12878) 21362711
chr1 200253645 200254942 ZNF274 GTRD no Blood (GM12878) 21362712
chr1 200253657 200255003 ZNF274 GTRD no Blood (GM12878) 21362713
chr1 200253710 200254992 ZNF274 GTRD no Blood (GM12878) 21362715
chr1 200253735 200254602 ZNF274 GTRD no Blood (GM12878) 21362717
chr1 200253766 200254782 ZNF274 GTRD no Blood (GM12878) 21362719
chr1 200253774 200254902 ZNF274 GTRD no Blood (GM12878) 21362720
chr1 200253787 200254957 ZNF274 GTRD no Blood (GM12878) 21362721
chr1 200253801 200254918 ZNF274 GTRD no Blood (GM12878) 21362722
chr1 200253803 200254618 ZNF274 GTRD no Blood (GM12878) 21362723
chr1 200253878 200254560 ZNF274 GTRD no Blood (GM12878) 21362726
chr1 200253890 200254831 ZNF274 GTRD no Blood (GM12878) 21362727
chr1 200253897 200254561 ZNF274 GTRD no Blood (GM12878) 21362728
chr1 200253907 200254658 ZNF274 GTRD no Blood (GM12878) 21362730
chr1 200253913 200255020 ZNF274 GTRD no Blood (GM12878) 21362732
chr1 200253924 200254900 ZNF274 GTRD no Blood (GM12878) 21362733
chr1 200253933 200254767 ZNF274 GTRD no Blood (GM12878) 21362734
chr1 200253941 200254633 ZNF274 GTRD no Blood (GM12878) 21362736
chr1 200253958 200254672 ZNF274 GTRD no Blood (GM12878) 21362739
chr1 200253985 200254626 ZNF274 GTRD no Blood (GM12878) 21362741
chr1 200253993 200254588 ZNF274 GTRD no Blood (GM12878) 21362742
chr1 200254094 200254536 ZNF274 GTRD no Blood (GM12878) 21362746
chr1 200254107 200254642 ZNF274 GTRD no Blood (GM12878) 21362747
chr1 200254515 200254536 IRF1 JASPAR yes 34428918
chr1 200254516 200254537 ZNF263 JASPAR yes 34428919
chr1 200254517 200254538 IRF1 JASPAR yes 34428920
chr1 200254517 200254538 ZNF263 JASPAR yes 34428921
chr1 200254520 200254541 ZNF263 JASPAR yes 34428922
chr1 200254521 200254536 PRDM1 JASPAR yes 34428923
chr1 200254521 200254542 IRF1 JASPAR yes 34428924
chr1 200254525 200254546 IRF1 JASPAR yes 34428925
chr1 200254525 200254546 ZNF263 JASPAR yes 34428926
chr1 200254529 200254550 IRF1 JASPAR yes 34428927
chr1 200254529 200254550 ZNF263 JASPAR yes 34428928
chr1 200254532 200254553 ZNF263 JASPAR yes 34428929
chr1 200254533 200254554 IRF1 JASPAR yes 34428930
chr1 200254533 200254554 ZNF263 JASPAR yes 34428931
chr1 200254536 200254557 ZNF263 JASPAR yes 34428932
Genes associated with rs561730627[chr1:200254536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More