EnhancerDB
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  3. rs561873734[chr1:199654559]
Enhancers that have rs561873734[chr1:199654559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 199645985 199663121 enh27409
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9)
Transcript factors that have rs561873734[chr1:199654559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 199654418 199654922 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362369
chr1 199654441 199654917 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362370
chr1 199654513 199654773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362371
chr1 199654517 199654887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362372
chr1 199654519 199654863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362373
chr1 199654534 199654918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362374
chr1 199654535 199654865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362375
chr1 199654550 199654560 HOXA13 JASPAR yes 34391004
chr1 199654550 199654560 HOXB13 JASPAR yes 34391005
chr1 199654550 199654560 HOXD13 JASPAR yes 34391006
chr1 199654556 199654896 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362376
chr1 199654559 199654889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21362377
Genes associated with rs561873734[chr1:199654559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More