EnhancerDB
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  3. rs56188008[chr17:7858341]
Enhancers that have rs56188008[chr17:7858341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 7853265 7861895 enh96727
Uterus Epithelial (MCF-7)
Transcript factors that have rs56188008[chr17:7858341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 7854065 7858802 TCF7L2 GTRD no Colon (HCT116) 108235896
chr17 7854421 7859138 ZNF274 GTRD no Blood (GM12878) 108235897
chr17 7854435 7860054 ZBTB33 GTRD no Lung (A549) 108235898
chr17 7854443 7859067 ZNF274 GTRD no Blood (GM12878) 108235899
chr17 7854624 7858456 TCF7L2 GTRD no Colon (HCT116) 108235906
chr17 7854650 7858905 ZNF274 GTRD no Blood (GM12878) 108235907
chr17 7854725 7858859 ZBTB33 GTRD no Lung (A549) 108235911
chr17 7854825 7859923 ZBTB33 GTRD no Lung (A549) 108235923
chr17 7854838 7858780 ZBTB33 GTRD no Lung (A549) 108235925
chr17 7854866 7858645 ZNF274 GTRD no Liver (HepG2) 108235926
chr17 7854899 7858778 ZBTB33 GTRD no Brain (SK-N-SH) 108235927
chr17 7854908 7858908 ZNF274 GTRD no Blood (GM12878) 108235928
chr17 7854913 7859111 ZNF274 GTRD no Blood (GM12878) 108235929
chr17 7854987 7859078 ZNF143 GTRD no Epithelial (MCF-7) 21741410
chr17 7854987 7859078 ZNF143 GTRD no Epithelial (MCF-7) 108235932
chr17 7855034 7858547 ZNF274 GTRD no Blood (GM12878) 108235935
chr17 7855094 7859260 ZBTB33 GTRD no Lung (A549) 108235937
chr17 7855748 7859010 ZNF143 GTRD no Epithelial (MCF-7) 21741414
chr17 7856045 7858982 ZNF143 GTRD no Epithelial (MCF-7) 21741415
chr17 7856079 7858892 ZNF143 GTRD no Epithelial (MCF-7) 21741416
chr17 7856098 7858894 ZNF143 GTRD no Epithelial (MCF-7) 21741417
chr17 7856157 7858442 ZNF143 GTRD no Epithelial (MCF-7) 21741418
chr17 7856177 7858950 ZNF143 GTRD no Epithelial (MCF-7) 21741419
chr17 7856184 7858595 ZNF143 GTRD no Epithelial (MCF-7) 21741420
chr17 7856298 7859164 ZNF143 GTRD no Epithelial (MCF-7) 21741422
chr17 7856453 7858745 ZNF143 GTRD no Epithelial (MCF-7) 21741423
chr17 7856463 7858918 ZNF143 GTRD no Epithelial (MCF-7) 21741424
chr17 7856487 7859036 ZNF143 GTRD no Epithelial (MCF-7) 21741425
chr17 7856509 7859088 ZNF143 GTRD no Epithelial (MCF-7) 21741426
chr17 7856572 7858836 ZNF143 GTRD no Epithelial (MCF-7) 21741429
chr17 7856623 7858698 ZNF143 GTRD no Epithelial (MCF-7) 21741430
chr17 7856740 7859013 ZNF143 GTRD no Epithelial (MCF-7) 21741434
chr17 7856747 7858510 ZNF143 GTRD no Epithelial (MCF-7) 21741435
chr17 7856776 7858609 ZNF143 GTRD no Epithelial (MCF-7) 21741437
chr17 7856777 7858364 ZNF143 GTRD no Epithelial (MCF-7) 21741438
chr17 7856823 7858955 ZNF143 GTRD no Epithelial (MCF-7) 21741444
chr17 7857748 7858918 ZNF143 GTRD no Epithelial (MCF-7) 21741464
chr17 7857755 7858994 ZNF143 GTRD no Epithelial (MCF-7) 21741465
chr17 7857767 7859042 ZNF143 GTRD no Epithelial (MCF-7) 21741466
chr17 7857786 7858990 ZNF143 GTRD no Epithelial (MCF-7) 21741468
chr17 7858099 7858975 ZNF143 GTRD no Epithelial (MCF-7) 21741469
chr17 7858276 7858880 ZNF143 GTRD no Epithelial (MCF-7) 21741470
chr17 7858311 7858978 ZNF143 GTRD no Epithelial (MCF-7) 21741471
chr17 7858331 7858343 ZBTB7A JASPAR yes 52958933
chr17 7858336 7858341 SP1 TRANSFAC yes 52958935
Genes associated with rs56188008[chr17:7858341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 8091652 8093564 - C17orf59 ENSG00000196544.6 8093564 233311 Esophagus 0.303038 15409