EnhancerDB
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  3. rs561957680[chr1:117078854]
Enhancers that have rs561957680[chr1:117078854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117076384 117085156 enh12185
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs561957680[chr1:117078854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117078847 117078868 IRF1 JASPAR yes 31817725
chr1 117078849 117078859 NFATC3 JASPAR yes 31817726
chr1 117078851 117078858 NFATC2 JASPAR yes 31817727
Genes associated with rs561957680[chr1:117078854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More