EnhancerDB
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  3. rs561958525[chr19:3551824]
Enhancers that have rs561958525[chr19:3551824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3550863 3556635 enh4966
Blood (OCI-LY7) Blood (T-cell) Thymus Blood (Karpas-422)
chr19 3551628 3551981 vista28301
VISTA
Transcript factors that have rs561958525[chr19:3551824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3550687 3551828 TCF7L2 GTRD no Colon (HCT116) 108367695
chr19 3550693 3552021 TCF7L2 GTRD no Colon (HCT116) 108367696
chr19 3550734 3552275 POLR2A UCSC Txn Factor no Conserved 108367697
chr19 3550801 3552496 TCF7L2 GTRD no Colon (HCT116) 108367698
chr19 3551091 3552244 TCF7L2 GTRD no Colon (HCT116) 108367699
chr19 3551406 3552127 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367701
chr19 3551518 3551870 ZNF274 GTRD no Blood (GM12878) 108367702
chr19 3551557 3552007 ZNF143 GTRD no Epithelial (MCF-7) 108367703
chr19 3551681 3552028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367704
chr19 3551703 3552432 TCF7L2 GTRD no Colon (HCT116) 108367705
chr19 3551778 3552258 TCF7L2 GTRD no Colon (HCT116) 108367706
chr19 3551818 3551839 ZNF263 JASPAR yes 70787782
chr19 3551818 3551839 ZNF263 JASPAR yes 112138466
chr19 3551821 3551842 ZNF263 JASPAR yes 70787783
chr19 3551821 3551842 ZNF263 JASPAR yes 112138467
chr19 3551822 3551833 E2F6 JASPAR yes 70787784
chr19 3551822 3551833 E2F6 JASPAR yes 112138468
chr19 3551824 3551845 ZNF263 JASPAR yes 70787785
chr19 3551824 3551845 ZNF263 JASPAR yes 112138469
Genes associated with rs561958525[chr19:3551824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More