EnhancerDB
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  3. vista28301[chr19:3551628-3551981]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28301[chr19:3551628-3551981]
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Tissue distribution of vista28301
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Transcription factor that possibly regulate vista28301[chr19:3551628-3551981]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3550734 3552275 POLR2A UCSC Txn Factor no Conserved 108367697
chr19 3551620 3551632 TEAD1 JASPAR yes 70787764
chr19 3551620 3551632 TEAD1 JASPAR yes 112138448
chr19 3551622 3551632 TEAD4 JASPAR yes 70787765
chr19 3551622 3551632 TEAD4 JASPAR yes 112138449
chr19 3551623 3551631 TEAD3 JASPAR yes 70787766
chr19 3551623 3551631 TEAD3 JASPAR yes 112138450
chr19 3551627 3551647 ESR1 JASPAR yes 70787767
chr19 3551627 3551647 ESR1 JASPAR yes 112138451
chr19 3551640 3551655 TFAP2C JASPAR yes 70787768
chr19 3551640 3551655 TFAP2C JASPAR yes 112138452
chr19 3551643 3551654 EBF1 JASPAR yes 70787769
chr19 3551643 3551654 EBF1 JASPAR yes 112138453
chr19 3551658 3551666 FEV JASPAR yes 70787770
chr19 3551658 3551666 FEV JASPAR yes 112138454
chr19 3551670 3551677 SP1 TRANSFAC yes 70787771
chr19 3551670 3551677 SP1 TRANSFAC yes 112138455
chr19 3551671 3551676 SP1 TRANSFAC yes 70787772
chr19 3551671 3551676 SP1 TRANSFAC yes 112138456
chr19 3551671 3551677 SP1 TRANSFAC yes 70787773
chr19 3551671 3551677 SP1 TRANSFAC yes 112138457
chr19 3551671 3551678 SP1 TRANSFAC yes 70787774
chr19 3551671 3551678 SP1 TRANSFAC yes 112138458
chr19 3551675 3551684 ZEB1 JASPAR yes 70787775
chr19 3551675 3551684 ZEB1 JASPAR yes 112138459
chr19 3551678 3551683 USF2 TRANSFAC yes 70787776
chr19 3551678 3551683 USF2 TRANSFAC yes 112138460
chr19 3551795 3551805 SP1 JASPAR yes 70787777
chr19 3551795 3551805 SP1 JASPAR yes 112138461
chr19 3551797 3551801 NFE TRANSFAC yes 70787778
chr19 3551797 3551801 NFE TRANSFAC yes 112138462
chr19 3551798 3551815 RARA JASPAR yes 70787779
chr19 3551798 3551815 RXRA JASPAR yes 70787780
chr19 3551798 3551815 RARA JASPAR yes 112138463
chr19 3551798 3551815 RXRA JASPAR yes 112138464
chr19 3551801 3551807 SP1 TRANSFAC yes 70787781
chr19 3551801 3551807 SP1 TRANSFAC yes 112138465
chr19 3551818 3551839 ZNF263 JASPAR yes 70787782
chr19 3551818 3551839 ZNF263 JASPAR yes 112138466
chr19 3551821 3551842 ZNF263 JASPAR yes 70787783
chr19 3551821 3551842 ZNF263 JASPAR yes 112138467
chr19 3551822 3551833 E2F6 JASPAR yes 70787784
chr19 3551822 3551833 E2F6 JASPAR yes 112138468
chr19 3551824 3551845 ZNF263 JASPAR yes 70787785
chr19 3551824 3551845 ZNF263 JASPAR yes 112138469
chr19 3551825 3551846 ZNF263 JASPAR yes 70787786
chr19 3551825 3551846 ZNF263 JASPAR yes 112138470
chr19 3551827 3551848 ZNF263 JASPAR yes 70787787
chr19 3551827 3551848 ZNF263 JASPAR yes 112138471
chr19 3551832 3551842 MZF1 JASPAR yes 70787788
chr19 3551832 3551842 MZF1 JASPAR yes 112138472
chr19 3551833 3551854 ZNF263 JASPAR yes 70787789
chr19 3551833 3551854 ZNF263 JASPAR yes 112138473
chr19 3551851 3551868 PAX1 JASPAR yes 70787790
chr19 3551851 3551868 PAX9 JASPAR yes 70787791
chr19 3551851 3551868 PAX1 JASPAR yes 112138474
chr19 3551851 3551868 PAX9 JASPAR yes 112138475
chr19 3551891 3551911 ESR1 JASPAR yes 70787792
chr19 3551891 3551911 ESR1 JASPAR yes 112138476
chr19 3551896 3551901 SP1 TRANSFAC yes 70787793
chr19 3551896 3551901 SP1 TRANSFAC yes 112138477
chr19 3551900 3551904 H4TF2 TRANSFAC yes 70787794
chr19 3551900 3551904 H4TF2 TRANSFAC yes 112138478
chr19 3551902 3551917 TFAP2A JASPAR yes 70787795
chr19 3551902 3551917 TFAP2A JASPAR yes 112138479
chr19 3551903 3551918 TFAP2A JASPAR yes 70787796
chr19 3551903 3551918 TFAP2C JASPAR yes 70787797
chr19 3551903 3551918 TFAP2A JASPAR yes 112138480
chr19 3551903 3551918 TFAP2C JASPAR yes 112138481
chr19 3551904 3551910 NFE2 TRANSFAC yes 70787798
chr19 3551904 3551910 NFE2 TRANSFAC yes 112138482
chr19 3551905 3551917 TFAP2A JASPAR yes 70787799
chr19 3551905 3551917 TFAP2B JASPAR yes 70787800
chr19 3551905 3551917 TFAP2C JASPAR yes 70787801
chr19 3551905 3551917 TFAP2A JASPAR yes 112138483
chr19 3551905 3551917 TFAP2B JASPAR yes 112138484
chr19 3551905 3551917 TFAP2C JASPAR yes 112138485
chr19 3551905 3551920 TFAP2A JASPAR yes 70787802
chr19 3551905 3551920 TFAP2A JASPAR yes 112138486
chr19 3551906 3551915 TFAP2A JASPAR yes 70787803
chr19 3551906 3551915 TFAP2A JASPAR yes 112138487
chr19 3551907 3551916 TFAP2A JASPAR yes 70787804
chr19 3551907 3551916 TFAP2A JASPAR yes 112138488
chr19 3551916 3551936 TP53 JASPAR yes 70787805
chr19 3551916 3551936 TP53 JASPAR yes 112138489
SNP sites on vista28301[chr19:3551628-3551981]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3551638 rs77859866 G A
ESR1 POLR2A
5395480
chr19 3551692 rs143191867 C T
POLR2A
5395481
chr19 3551824 rs561958525 C A
E2F6 POLR2A ZNF263
5395482
chr19 3551912 rs376430893 C G,T
POLR2A TFAP2A TFAP2B TFAP2C
5395483
chr19 3551913 rs117857535 G A
POLR2A TFAP2A TFAP2B TFAP2C
5395484
chr19 3551946 rs534863433 T C
POLR2A
5395485
chr19 3551969 rs1715094 T C
POLR2A
5395486
Genes possibly regulated by vista28301[chr19:3551628-3551981]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 28912
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 49310
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 54643
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 77693
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 87524
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 79206
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 66430
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 45143
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 25168
Expression level of Genes
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miRNAs possibly regulated by vista28301[chr19:3551628-3551981]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results