EnhancerDB
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  3. rs562013998[chr6:43782660]
Enhancers that have rs562013998[chr6:43782660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562013998[chr6:43782660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43782645 43782660 MEF2A JASPAR yes 101788319
chr6 43782646 43782660 POU4F1 JASPAR yes 101788320
chr6 43782646 43782662 POU4F2 JASPAR yes 101788321
chr6 43782646 43782662 POU4F3 JASPAR yes 101788322
chr6 43782652 43782662 HOXC10 JASPAR yes 101788328
chr6 43782652 43782662 HOXD13 JASPAR yes 101788329
chr6 43782652 43782663 HOXC11 JASPAR yes 101788330
chr6 43782652 43782663 HOXC13 JASPAR yes 101788331
chr6 43782653 43782663 GSX2 JASPAR yes 101788332
chr6 43782654 43782662 NKX6-1 JASPAR yes 101788333
chr6 43782654 43782662 NKX6-2 JASPAR yes 101788334
chr6 43782654 43782664 POU6F2 JASPAR yes 101788335
Genes associated with rs562013998[chr6:43782660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More