EnhancerDB
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  3. rs562052543[chr2:120453814]
Enhancers that have rs562052543[chr2:120453814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 120449136 120464615 enh5803
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs562052543[chr2:120453814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 120453803 120453817 EBF1 JASPAR yes 76494293
chr2 120453810 120453820 GSC2 JASPAR yes 76494294
chr2 120453810 120453820 GSC JASPAR yes 76494295
chr2 120453811 120453819 OTX1 JASPAR yes 76494296
chr2 120453811 120453819 OTX2 JASPAR yes 76494297
chr2 120453811 120453819 RHOXF1 JASPAR yes 76494298
chr2 120453811 120453820 PITX3 JASPAR yes 76494299
Genes associated with rs562052543[chr2:120453814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More