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- rs562058776[chr5:172199289]
Enhancers that have rs562058776[chr5:172199289]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr5 |
172198673 |
172201009 |
vista1399 |
|
|
| chr5 |
172198749 |
172199959 |
vista50164 |
|
|
Transcript factors that have rs562058776[chr5:172199289]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr5
|
172191953
|
172200023
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107693851
|
|
|
chr5
|
172191953
|
172200023
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108537470
|
|
|
chr5
|
172191953
|
172200023
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108537471
|
|
|
chr5
|
172191953
|
172200023
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108537472
|
|
|
chr5
|
172198967
|
172199665
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
107693854
|
|
|
chr5
|
172198967
|
172199665
|
CTCF
|
UCSC Txn Factor
|
no
|
Conserved
|
108537480
|
|
|
chr5
|
172199005
|
172199925
|
EP300
|
UCSC Txn Factor
|
no
|
Conserved
|
107693855
|
|
|
chr5
|
172199005
|
172199925
|
EP300
|
UCSC Txn Factor
|
no
|
Conserved
|
108537481
|
|
|
chr5
|
172199288
|
172199303
|
RUNX2
|
JASPAR
|
yes
|
|
70762757
|
|
|
chr5
|
172199288
|
172199303
|
RUNX2
|
JASPAR
|
yes
|
|
111955476
|
|
Genes associated with rs562058776[chr5:172199289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |