EnhancerDB
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  3. rs562133723[chr1:42092090]
Enhancers that have rs562133723[chr1:42092090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs562133723[chr1:42092090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42092080 42092095 TFAP2A JASPAR yes 28403028
chr1 42092080 42092095 TFAP2C JASPAR yes 28403029
chr1 42092083 42092095 TFAP2B JASPAR yes 28403030
chr1 42092083 42092095 TFAP2C JASPAR yes 28403031
chr1 42092090 42092094 LFA1 TRANSFAC yes 28403032
Genes associated with rs562133723[chr1:42092090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More