EnhancerDB
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  3. rs562191946[chr19:1859215]
Enhancers that have rs562191946[chr19:1859215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs562191946[chr19:1859215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355215
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355216
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355217
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 21832698
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355222
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355223
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355224
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 21832748
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355295
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355296
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355297
chr19 1857472 1860706 ZNF274 GTRD no Bone Marrow (K562) 21833025
chr19 1857472 1860706 ZNF274 GTRD no Bone Marrow (K562) 108355719
chr19 1859200 1859221 ZNF263 JASPAR yes 112033381
chr19 1859203 1859224 ZNF263 JASPAR yes 112033382
chr19 1859206 1859227 ZNF263 JASPAR yes 112033383
chr19 1859214 1859233 PAX5 JASPAR yes 112033384
Genes associated with rs562191946[chr19:1859215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More